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10 models found

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8 public code

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10 public weights

BioLinkBERT-Cardiology (LoRA-adapted)

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · BioLinkBERT-base + LoRA · 2025

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Model weights public

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Training code private

LoRA-adapted domain-specialized cardiology text embedding model built on BioLinkBERT (340M parameters), identified as the top performer among 10 encoder- and decoder-style transformer architectures benchmarked head-to-head for cardiology semantic retrieval. LoRA fine-tuning on ~150,000 cardiology-textbook-derived sentence pairs raised its cardiology semantic-separation score from 0.033 (zero-shot) to 0.510, the highest of any evaluated architecture (including decoder models up to 10x larger), while remaining Pareto-optimal for the separation/throughput trade-off at 143.5 embeddings/sec and a 1.51GB memory footprint.

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0078

MELP

University of Hong Kong (HKU-MedAI) · 2025

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Code & model weights public

Multi-scale ECG-language pretraining model that aligns 12-lead ECG signals with clinical text reports at three granularities -- token, beat, and rhythm level -- rather than a single global embedding. First fine-tunes a cardiology-specialized text encoder to improve understanding of ECG report language, then trains an ECG-FM-initialized ECG encoder against it with hierarchical contrastive supervision. Outperforms prior ECG-language and self-supervised baselines including MERL, ST-MEM, and HeartLang on zero-shot classification, linear probing, and ECG report generation, with especially large gains at low label fractions. Developed at the University of Hong Kong (HKU-MedAI).

12-lead ECG

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ECG

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Multi-label classification

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Classification

Hybrid

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Hybrid / Multi-branch

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0082

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Subject Count: 225,389

MPNet-Cardiology (LoRA-adapted)

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · MPNet-base + LoRA · 2025

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Model weights public

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Training code private

LoRA-adapted domain-specialized cardiology text embedding model built on MPNet-base (109M parameters), identified as Pareto-optimal for balanced accuracy/throughput deployment among 10 encoder- and decoder-style architectures benchmarked for cardiology semantic retrieval. LoRA fine-tuning on ~150,000 cardiology-textbook-derived sentence pairs raised its cardiology semantic-separation score from 0.175 (zero-shot) to 0.386, while delivering 228.8 embeddings/sec at a sub-1GB (0.73GB) memory footprint, making it suitable for consumer-GPU and general-purpose medical NLP deployment where full BioLinkBERT-level accuracy is not required.

Clinical text

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Text & EHR

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Embedding

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Representation Learning

Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Model ID: 0080

xECG

Medical University of Innsbruck (Dlaska Lab) · base_model_v1 · 2025

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Code & model weights public

ECG foundation model built on the xLSTM (extended LSTM) architecture: a bidirectional stack of nine alternating scalar- and matrix-memory LSTM blocks that scales linearly with sequence length, unlike the quadratic cost of transformer-based ECG models. Pretrained with SimDINOv2, a coding-rate-regularized self-distillation (DINO) objective adapted from computer vision to ECG time series, on roughly 8 million recordings from CODE, INCART, and Chapman-Shaoxing-Ningbo. Introduced alongside BenchECG, a standardized 8-dataset/10-task benchmark, on which xECG achieves the best average rank of any publicly available ECG foundation model, with particular strength on long-context tasks (30-minute ambulatory arrhythmia classification, multi-hour sleep-apnea segmentation) where transformer-based models are computationally limited.

12-lead ECG

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ECG

General Purpose / Multi-task

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General / Foundation

Sleep apnea

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Other Conditions

Multi-label classification

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Classification

Binary classification

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Classification

Embedding

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Representation Learning

RNN / LSTM / GRU

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Recurrent

PyTorch

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PyTorch

MIT

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Permissive


Model ID: 0063

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Subject Count: 45,184

CLEF-Medium

Nokia Bell Labs · 2025

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Code & model weights public

Single-lead ECG foundation model pretrained with clinically-guided contrastive learning: rather than relying on hand-labeled tasks, it uses routinely collected clinical metadata and risk scores from 161,000 MIMIC-IV-ECG patients as the training signal. Released in three sizes - Small (~448K parameters), Medium (30.7M), and Large (~296M) - and benchmarked against other ECG foundation models like ECGFounder across 18 tasks and 7 held-out datasets. Developed by Nokia Bell Labs.

Single-lead ECG

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ECG

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Embedding

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Transformer

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Transformer

PyTorch

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PyTorch

BSD 3-Clause

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Model ID: 0013

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Subject Count: 161,352

CMR-CLIP

Cleveland Clinic / Case Western (Nakashima et al.) · 2026

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Code & model weights public

Vision-language model that jointly embeds a cardiac MRI study, treated as video, with the impression section of its clinical report. Combines a video encoder over cine/LGE frame sequences with a Bio+ClinicalBERT text encoder using CLIP-style contrastive training. Supports zero-shot and few-shot classification of cardiomyopathies, amyloidosis, and LV dysfunction, plus image/report retrieval and structured report drafting. Trained on a private, single-institution corpus of roughly 11,000-14,000 CMR study-report pairs from Cleveland Clinic and Case Western.

Cardiac MRI

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Cardiac MRI

Clinical text

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Text & EHR

Multimodal

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Multimodal

General Purpose / Multi-task

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General / Foundation

Non-ischemic cardiomyopathy

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Structural Heart & Cardiomyopathy

Ischemic cardiomyopathy

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Coronary & Ischemic Disease

Cardiac amyloidosis

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Structural Heart & Cardiomyopathy

LV systolic dysfunction (LVSD)

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Cardiac Function & Hemodynamics

LV dilation

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Structural Heart & Cardiomyopathy

Left ventricular hypertrophy (LVH)

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Structural Heart & Cardiomyopathy

Multi-label classification

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Classification

Binary classification

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Classification

Embedding

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Representation Learning

Hybrid

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PyTorch

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PyTorch

MIT

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Model ID: 0007

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Subject Count: 12,500

CardioEmbed

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · Qwen3-Embedding-8B + LoRA · 2025

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Code & model weights public

Domain-specialized text embedding model for clinical cardiology, built by fine-tuning the Qwen3-Embedding-8B language model with LoRA adapters via contrastive learning on cardiology textbook sentences. Reaches 99.60% top-1 accuracy on cardiology-specific semantic retrieval, nearly 16 points above the prior MedTE baseline. The training corpus draws on roughly 150,000 sentences from seven copyrighted textbooks and is not public, though the resulting model weights are freely downloadable.

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Retrieval

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Representation Learning

Embedding

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Representation Learning

LLM

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0051

EchoJEPA

University of Toronto / Vector Institute (Bo Wang Lab) · ViT-L · 2026

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Code & model weights public

Echocardiography foundation model trained with a latent-predictive (V-JEPA2-style) self-supervised objective rather than pixel reconstruction, pretrained on 18 million echocardiograms from 300,000 patients drawn from the public MIMIC-IV-ECHO dataset plus a private multi-site archive - reportedly the largest echo pretraining corpus assembled to date. With a frozen backbone and only lightweight added layers, it outperforms prior echo foundation models by roughly 20% on ejection-fraction estimation and 17% on right-ventricular pressure estimation, reaches strong view-classification accuracy using just 1% of labels, and transfers zero-shot to pediatric echo better than fully fine-tuned baselines. Developed by the University of Toronto's Bo Wang Lab.

Echocardiography video

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Echocardiography

Echocardiographic view classification

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General / Foundation

LVEF estimation

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Cardiac Function & Hemodynamics

General Purpose / Multi-task

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General / Foundation

Multi-class classification

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Classification

Regression

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Regression

Embedding

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Representation Learning

Vision Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Model ID: 0038

PaPaGei-S

Nokia Bell Labs · 2025

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Code & model weights public

One of the first open foundation models for PPG signals, pretrained on over 57,000 hours (20 million segments) of publicly available data using a morphology-aware self-supervised objective. Evaluated across 20 tasks from 10 datasets spanning cardiovascular health, sleep disorders, pregnancy monitoring, and general wellbeing. Developed by Nokia Bell Labs and published at ICLR 2025.

PPG / wearable

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PPG / Wearable

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

CNN (1D)

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Convolutional (CNN)

PyTorch

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PyTorch

BSD 3-Clause

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Model ID: 0048

Pulse-PPG

University of Illinois Urbana-Champaign · 2025

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Code & model weights public

Open-source PPG foundation model pretrained directly on real-world, field-collected wearable data rather than clean clinical signals alone, aiming for better generalization to the noise of free-living conditions. Uses a ResNet-based encoder trained with a relative contrastive (RelCon) self-supervised objective, and is directly benchmarked against PaPaGei. Developed at the University of Illinois Urbana-Champaign and published at UbiComp 2025.

PPG / wearable

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PPG / Wearable

General Purpose / Multi-task

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Embedding

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CNN (1D)

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Convolutional (CNN)

PyTorch

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PyTorch

MIT

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Model ID: 0050