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CIS-UNet

University of Florida (Cooper, Shao Labs) · 2024

code

Training code public

Deep learning model for multi-class 3D segmentation of the aorta and its thirteen branches from CT angiography, intended to support planning of endovascular aortic interventions. CIS-UNet combines a CNN encoder with a symmetric decoder and a novel Context-aware Shifted Window Self-Attention (CSW-SA) bottleneck block that adapts the Swin transformer's patch-merging mechanism to more efficiently capture global spatial context. Trained and evaluated via 4-fold cross-validation on the first public multi-branch aorta CTA dataset (59 patients), CIS-UNet outperformed the state-of-the-art SwinUNETR baseline, achieving a mean Dice of 0.713 vs. 0.697 and mean surface distance of 2.78mm vs. 3.39mm, while being more computationally efficient.

CT angiography

Filter by Modality:
Cardiac CT

Aortic anatomy segmentation / measurement

Filter by Disease / Trait:
Vascular Disease

Segmentation

Filter by Task Type:
Segmentation & Detection

Hybrid

Filter by Architecture:
Hybrid / Multi-branch

PyTorch

Filter by Framework:
PyTorch


Model ID: 0130

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Subject Count: 59