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9 models found

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7 public code

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8 public weights

BioLinkBERT-Cardiology (LoRA-adapted)

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · BioLinkBERT-base + LoRA · 2025

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Model weights public

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Training code private

LoRA-adapted domain-specialized cardiology text embedding model built on BioLinkBERT (340M parameters), identified as the top performer among 10 encoder- and decoder-style transformer architectures benchmarked head-to-head for cardiology semantic retrieval. LoRA fine-tuning on ~150,000 cardiology-textbook-derived sentence pairs raised its cardiology semantic-separation score from 0.033 (zero-shot) to 0.510, the highest of any evaluated architecture (including decoder models up to 10x larger), while remaining Pareto-optimal for the separation/throughput trade-off at 143.5 embeddings/sec and a 1.51GB memory footprint.

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0078

CSFM (Cardiac Sensing Foundation Model)

University of Oxford (Gu et al.) · 2026

code

Training code public

Multimodal cardiac-sensing foundation model pretrained with generative masked pretraining on ECG, PPG, and paired clinical/machine-generated text reports from roughly 1.7 million individuals across three large-scale critical-care and outpatient ECG datasets. A channel-embedding scheme lets the same model accept any combination of 12-lead ECG, single-lead/wearable ECG, and PPG. The resulting embeddings transfer to diagnostic classification, demographic recognition, vital-sign measurement, clinical-outcome prediction, and ECG question answering. Pretrained weights require a signed academic-access agreement rather than an open download.

12-lead ECG

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ECG

Single-lead ECG

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ECG

PPG / wearable

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PPG / Wearable

Clinical text

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Text & EHR

Multimodal

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Multimodal

General Purpose / Multi-task

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General / Foundation

Cardiac aging / biological age

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Prognosis & Aging

Embedding

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Representation Learning

Regression

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Regression

Transformer

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Transformer

PyTorch

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PyTorch


Model ID: 0058

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Subject Count: 161,352

MPNet-Cardiology (LoRA-adapted)

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · MPNet-base + LoRA · 2025

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Model weights public

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Training code private

LoRA-adapted domain-specialized cardiology text embedding model built on MPNet-base (109M parameters), identified as Pareto-optimal for balanced accuracy/throughput deployment among 10 encoder- and decoder-style architectures benchmarked for cardiology semantic retrieval. LoRA fine-tuning on ~150,000 cardiology-textbook-derived sentence pairs raised its cardiology semantic-separation score from 0.175 (zero-shot) to 0.386, while delivering 228.8 embeddings/sec at a sub-1GB (0.73GB) memory footprint, making it suitable for consumer-GPU and general-purpose medical NLP deployment where full BioLinkBERT-level accuracy is not required.

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0080

CLEF-Medium

Nokia Bell Labs · 2025

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Code & model weights public

Single-lead ECG foundation model pretrained with clinically-guided contrastive learning: rather than relying on hand-labeled tasks, it uses routinely collected clinical metadata and risk scores from 161,000 MIMIC-IV-ECG patients as the training signal. Released in three sizes - Small (~448K parameters), Medium (30.7M), and Large (~296M) - and benchmarked against other ECG foundation models like ECGFounder across 18 tasks and 7 held-out datasets. Developed by Nokia Bell Labs.

Single-lead ECG

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ECG

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Transformer

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Transformer

PyTorch

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PyTorch

BSD 3-Clause

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Permissive


Model ID: 0013

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Subject Count: 161,352

CardioEmbed

University of Nevada Las Vegas / Concorde Career Colleges (Young & Matthews) · Qwen3-Embedding-8B + LoRA · 2025

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Code & model weights public

Domain-specialized text embedding model for clinical cardiology, built by fine-tuning the Qwen3-Embedding-8B language model with LoRA adapters via contrastive learning on cardiology textbook sentences. Reaches 99.60% top-1 accuracy on cardiology-specific semantic retrieval, nearly 16 points above the prior MedTE baseline. The training corpus draws on roughly 150,000 sentences from seven copyrighted textbooks and is not public, though the resulting model weights are freely downloadable.

Clinical text

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Text & EHR

General Purpose / Multi-task

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General / Foundation

Retrieval

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Representation Learning

Embedding

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Representation Learning

LLM

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0051

EchoFM

Massachusetts General Hospital / Harvard Medical School (Kim et al.) · 2025

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Code & model weights public

General-purpose vision foundation model for echocardiography, pretrained with a masked autoencoder combined with a periodic contrastive loss designed around the cyclical nature of cardiac motion. Validated on chamber segmentation, view classification, and disease detection, with its largest advantage over non-pretrained baselines and natural-image models like SAM appearing in low-label settings. Pretrained on roughly 290,000 echo clips from a mix of internal and public sources. Developed by Massachusetts General Hospital and Harvard Medical School.

Echocardiography video

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Echocardiography

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Vision Transformer

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Transformer

PyTorch

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PyTorch

CC BY-NC-ND 4.0

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Non-commercial / Research-only


Model ID: 0037

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Subject Count: 6,500

EchoJEPA

University of Toronto / Vector Institute (Bo Wang Lab) · ViT-L · 2026

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Code & model weights public

Echocardiography foundation model trained with a latent-predictive (V-JEPA2-style) self-supervised objective rather than pixel reconstruction, pretrained on 18 million echocardiograms from 300,000 patients drawn from the public MIMIC-IV-ECHO dataset plus a private multi-site archive - reportedly the largest echo pretraining corpus assembled to date. With a frozen backbone and only lightweight added layers, it outperforms prior echo foundation models by roughly 20% on ejection-fraction estimation and 17% on right-ventricular pressure estimation, reaches strong view-classification accuracy using just 1% of labels, and transfers zero-shot to pediatric echo better than fully fine-tuned baselines. Developed by the University of Toronto's Bo Wang Lab.

Echocardiography video

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Echocardiography

Echocardiographic view classification

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General / Foundation

LVEF estimation

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Cardiac Function & Hemodynamics

General Purpose / Multi-task

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General / Foundation

Multi-class classification

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Classification

Regression

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Regression

Embedding

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Representation Learning

Vision Transformer

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Transformer

PyTorch

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PyTorch

Apache 2.0

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Permissive


Model ID: 0038

ST-MEM

VUNO Inc. · ViT-B/75 · 2024

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Code & model weights public

Self-supervised ECG foundation model that adapts to varying lead combinations by patchifying 12-lead recordings across both space (leads) and time, then pretraining a ViT-B/75 encoder-decoder with a masked-autoencoder objective. Published at ICLR 2024 by VUNO Inc., and pretrained on the Chapman-Shaoxing-Ningbo dataset along with several other public 12-lead sources.

12-lead ECG

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ECG

General Purpose / Multi-task

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General / Foundation

Embedding

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Representation Learning

Vision Transformer

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Transformer

PyTorch

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PyTorch

CC BY-NC 4.0

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Non-commercial / Research-only


Model ID: 0032

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Subject Count: 45,152

TARGET-AI ECG-image ViT

Yale School of Medicine (CarDS Lab) · ecg-clip-beit-base-384 · 2025

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Code & model weights public

BEiT-base Vision Transformer that embeds images of standard 12-lead ECG printouts into a representation space, enabling zero-shot screening for structural heart disease by comparing a new ECG against reference case/control embedding centroids rather than requiring task-specific training. Trained on private Yale New Haven Health System ECG images and validated against the public EchoNext dataset. Aimed at scanned or legacy ECG images still common in EHR systems. Developed by Yale's CarDS Lab.

12-lead ECG image

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ECG

Structural heart disease (composite)

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Structural Heart & Cardiomyopathy

Embedding

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Representation Learning

Vision Transformer

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Transformer

PyTorch

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PyTorch

CC BY-NC 4.0

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Non-commercial / Research-only


Model ID: 0027

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Subject Count: 159,322