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SiamQuality

Emory University / Georgia Institute of Technology / Duke University / UCSF (Ding, Guo, Chen, Lee, Rudin, Hu)

PPG / wearable

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PPG / Wearable

Atrial fibrillation

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Arrhythmia

Blood pressure estimation

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Cardiac Function & Hemodynamics

Heart rate estimation

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Cardiac Function & Hemodynamics

Binary classification

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Classification

Regression

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Regression

CNN (1D)

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Convolutional (CNN)

description View paper

Training code and model weights not public. Contact creators for more information.

Self-supervised foundation model for photoplethysmography (PPG) that explicitly targets the low-signal-quality problem endemic to real-world wearable and bedside PPG, rather than assuming clean input. A Siamese ResNet (SimSiam-style) encoder is pretrained to produce similar representations for temporally-adjacent high- and low-quality PPG segments presumed to share the same underlying physiological state, with curriculum learning that gradually increases the artifact-level gap between paired segments. Pretrained on over 36 million 30-second PPG pairs drawn from more than 24,100 UCSF ICU patients, then fine-tuned and evaluated on six downstream cardiovascular-monitoring datasets/tasks (heart rate, respiratory rate, blood pressure, and atrial-fibrillation detection), where it exceeds prior state-of-the-art by roughly 75% on respiratory-rate estimation and 5% on AF detection, with performance scaling with backbone depth (ResNet152 best). Code and the pretraining dataset are not public; the pretraining data is available upon request under a UCSF-Emory data use agreement.

memory Specifications

category

Architecture

CNN (1D)

Siamese, shared-weight ResNet (1D CNN) encoder trained with a SimSiam-style similarity loss on quality-mismatched positive pairs, plus curriculum learning over increasing artifact severity

calendar_month

Added to catalog

2026-08-10

description Publication

database Training & evaluation data

UCSF ICU PPG Cohort (SiamQuality pretraining)

pretrain

public 24,100 subjects · USA · 2013-2018

Waveform dataset including PPG, other physiological signals, cardiac arrhythmia alarms, and linked EHR from more than 24,100 ICU patients at UCSF Medical Center; used to derive over 36 million 30-second PPG pairs for contrastive pretraining.

science Capabilities & performance

Atrial fibrillation detection from wearable/bedside PPG

Binary classification Atrial fibrillation

Blood pressure estimation from wearable/bedside PPG

Regression Blood pressure estimation

Heart-rate and respiratory-rate estimation from wearable/bedside PPG

Regression Heart rate estimation